# scvi-tools MCP An MCP (Model Context Protocol) server that gives LLMs structured access to [scvi-tools](https://scvi-tools.org) — a Python library for deep probabilistic analysis of single-cell omics data. The bundled knowledge base covers model documentation, tutorials, API reference, workflow templates, community FAQ, and the official scvi-tools Hugging Face Hub model registry. ```{toctree} :maxdepth: 2 :caption: Contents installation architecture/index faq references ```